STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN863_9080Conserved hypothetical protein (DUF305). (161 aa)    
Predicted Functional Partners:
BN863_9070
Lead, cadmium, zinc and mercury transporting ATP ase; Copper-translocating P-type ATPase.
 
  
 0.846
BN863_9090
RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.843
BN863_9040
Heavy metal RND efflux outer membrane protein, C zcC family.
 
     0.645
BN863_9060
Transcriptional regulator, AraC family.
 
     0.616
BN863_9050
Conserved hypothetical protein (DUF3347).
 
     0.528
BN863_9030
'cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
     0.516
CDF78912.1
Heavy-metal translocating P-type ATPase.
 
    0.488
BN863_9100
Conserved hypothetical protein.
       0.468
CDF78911.1
Transcriptional regulator, Fur family; Belongs to the Fur family.
  
     0.404
Your Current Organism:
Formosa agariphila
NCBI taxonomy Id: 1347342
Other names: Bacteroidetes bacterium KMM 3901, F. agariphila KMM 3901, Formosa agariphila KMM 3901
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.