STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001005315_00676Unannotated protein. (230 aa)    
Predicted Functional Partners:
GCA_001005315_00674
Unannotated protein.
 
  0.977
GCA_001005315_04437
Unannotated protein.
 
 
  0.954
GCA_001005315_00673
Unannotated protein.
 
 
  0.946
GCA_001005315_00675
Unannotated protein.
 
     0.880
GCA_001005315_04438
Unannotated protein.
 
 
  0.855
GCA_001005315_02692
Unannotated protein.
  
 0.733
GCA_001005315_02993
Unannotated protein.
  
  0.679
GCA_001005315_00383
Unannotated protein.
  
  
  0.666
GCA_001005315_03499
Unannotated protein.
 
  
 
0.661
GCA_001005315_02350
Unannotated protein.
  
  
  0.643
Your Current Organism:
Kordia jejudonensis
NCBI taxonomy Id: 1348245
Other names: CECT 8368, K. jejudonensis, KCTC 32426, Kordia jejudonensis Park et al. 2014, Kordia sp. SSK3-3, strain SSK3-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.