STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001005315_01753Unannotated protein. (433 aa)    
Predicted Functional Partners:
GCA_001005315_03987
Unannotated protein.
 
  
 0.695
GCA_001005315_01179
Unannotated protein.
 
   
 0.592
GCA_001005315_01752
Unannotated protein.
       0.551
GCA_001005315_00242
Unannotated protein.
  
   
 0.545
GCA_001005315_01754
Unannotated protein.
       0.524
GCA_001005315_01472
Unannotated protein.
 
     0.518
GCA_001005315_00061
Unannotated protein.
  
     0.481
Your Current Organism:
Kordia jejudonensis
NCBI taxonomy Id: 1348245
Other names: CECT 8368, K. jejudonensis, KCTC 32426, Kordia jejudonensis Park et al. 2014, Kordia sp. SSK3-3, strain SSK3-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.