Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR77590.1Exopolysaccharide production protein. (410 aa)    
Predicted Functional Partners:
EPR77591.1
Exopolysaccharide production protein.
 
    
0.780
EPR76408.1
Hypothetical protein.
  
     0.773
EPR76598.1
Hypothetical protein.
  
     0.772
EPR76887.1
Hypothetical protein.
  
     0.766
EPR77465.1
Very large tegument protein.
  
    0.763
EPR76037.1
Hypothetical protein.
  
     0.757
EPR77600.1
Hypothetical protein.
  
     0.749
EPR76379.1
Putative DNA-binding protein.
  
     0.746
EPR76439.1
Hypothetical protein.
  
     0.739
EPR75609.1
Heat shock protein.
  
     0.738
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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