Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gmdGDP-mannose 4,6 dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (329 aa)    
Predicted Functional Partners:
EPR75330.1
Mannose-1-phosphate guanylyltransferase (GDP).
 
 
 0.803
EPR77596.1
GDP-mannose 4,6 dehydratase; Overlaps CDS with the same product name; overlaps another CDS with the same product name.
 
    
0.786
EPR76346.1
Cupin 2.
  
 
 0.768
EPR77541.1
UDP-N-acetylglucosamine 4,6-dehydratase.
  
  
 0.688
EPR76603.1
UDP-glucose dehydrogenase.
  
 
 0.641
EPR76637.1
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.639
EPR77594.1
Polysaccharide biosynthesis protein.
  
 
  0.563
EPR77593.1
Mannose-6-phosphate isomerase.
     
 0.541
whiB
Sporulation regulatory protein WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
       0.483
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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