Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR77605.1Hypothetical protein. (430 aa)    
Predicted Functional Partners:
EPR77607.1
Putative secreted protein.
 
    0.938
EPR77608.1
Membrane protein EccB4, component of Type VII secretion system ESX-4.
 
    0.938
EPR77606.1
MoxR-like ATPase.
 
    0.929
EPR77609.1
Integral membrane protein.
 
     0.924
EPR77604.1
Putative CONSERVED TRANSMEMBRANE PROTEIN.
 
  
 0.821
EPR77603.1
Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage.
 
    0.788
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
      
 0.496
EPR77611.1
Sensor histidine kinase MtrB.
       0.476
EPR77612.1
Lipoprotein LpqB.
       0.467
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
      
 0.406
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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