STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR77607.1Putative secreted protein. (392 aa)    
Predicted Functional Partners:
EPR77608.1
Membrane protein EccB4, component of Type VII secretion system ESX-4.
 
     0.963
EPR77609.1
Integral membrane protein.
 
     0.963
EPR77605.1
Hypothetical protein.
 
    0.938
EPR77603.1
Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage.
 
    0.781
EPR77604.1
Putative CONSERVED TRANSMEMBRANE PROTEIN.
 
    0.781
EPR77606.1
MoxR-like ATPase.
 
     0.756
EPR77612.1
Lipoprotein LpqB.
 
     0.687
EPR77598.1
Putative glycosyl transferase.
  
     0.570
EPR77611.1
Sensor histidine kinase MtrB.
       0.555
EPR77613.1
Phosphoribosyltransferase domain protein; Protein YhgH required for utilization of DNA as sole source of carbon and energy.
 
     0.543
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.