STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR77574.1Hypothetical protein associated with desferrioxamine E biosynthesis. (295 aa)    
Predicted Functional Partners:
EPR77573.1
ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.833
EPR77571.1
ABC-type Fe3+-siderophore transport system, ATPase component.
    0.830
EPR77572.1
ABC-type Fe3+-siderophore transport system, permease 2 component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.825
EPR77570.1
Iron ABC transporter permease.
 
  
 0.808
EPR75914.1
Siderophore-interacting protein.
 
     0.572
EPR77575.1
Hypothetical protein.
       0.501
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.