STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR77460.1Proteorhodopsin. (273 aa)    
Predicted Functional Partners:
EPR77333.1
Hypothetical protein.
  
     0.583
EPR77501.1
Hypothetical protein.
  
     0.542
EPR77459.1
Transcriptional regulator, MarR family.
       0.539
EPR77552.1
Phytoene dehydrogenase.
 
   
 0.515
EPR75483.1
Hypothetical protein.
  
     0.510
EPR75462.1
Hypothetical protein; Catalyzes the cleavage of beta-carotene at its central double bond (15,15') to yield two molecules of all-trans-retinal. Belongs to the Brp/Blh beta-carotene diooxygenase family.
 
     0.502
EPR77165.1
Hypothetical protein.
  
     0.495
EPR75151.1
Hypothetical protein.
  
     0.490
EPR77553.1
Phytoene synthase.
 
   
 0.443
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
       0.435
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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