Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EPR77488.1Succinate-semialdehyde dehydrogenase [NADP+]; Belongs to the aldehyde dehydrogenase family. (488 aa)    
Predicted Functional Partners:
EPR77487.1
Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.951
EPR77241.1
Aldehyde dehydrogenase; Overlaps CDS with the same product name; overlaps another CDS with the same product name.
 
    
0.886
EPR74999.1
Glutamate synthase [NADPH] large chain.
  
 
 0.852
EPR75334.1
Succinate dehydrogenase flavoprotein subunit.
   
  0.698
EPR75332.1
Succinate dehydrogenase cytochrome b-556 subunit.
   
 
  0.671
EPR75333.1
Succinate dehydrogenase hydrophobic membrane anchor protein.
   
 
  0.670
EPR75335.1
Succinate dehydrogenase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
   
 
  0.670
EPR76063.1
Succinate-semialdehyde dehydrogenase [NADP+]; Belongs to the aldehyde dehydrogenase family.
     
  0.663
EPR77383.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.612
EPR77489.1
23S rRNA (guanine-N-2-) -methyltransferase rlmG; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.
       0.581
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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