Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EPR77513.1ABC-type transporter, ATPase component. (235 aa)    
Predicted Functional Partners:
EPR77515.1
ABC transporter (iron.B12.siderophore.hemin), permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.976
EPR77573.1
ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.969
EPR76799.1
Iron(III) dicitrate transport system permease protein FecD; TCDB 3.A.1.14.1; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.955
EPR76720.1
Heme ABC transporter, permease protein HmuU; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.954
EPR77514.1
ABC transporter (iron.B12.siderophore.hemin), periplasmic substrate-binding component.
 
 0.949
EPR77572.1
ABC-type Fe3+-siderophore transport system, permease 2 component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.925
EPR77570.1
Iron ABC transporter permease.
  
 0.840
EPR76800.1
Iron transport system substrate-binding protein.
 
 0.803
EPR75854.1
Transport ATP-binding protein CydCD.
    
  0.795
EPR77153.1
Manganese ABC transporter, ATP-binding protein SitB.
     
  0.712
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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