Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR77520.1Protein of unknown function DUF181. (612 aa)    
Predicted Functional Partners:
EPR77516.1
HlyB/MsbA family ABC transporter.
 
     0.829
EPR77519.1
Protein of unknown function DUF181.
 
    
0.829
EPR77517.1
HlyB/MsbA family ABC transporter.
 
    0.770
EPR77514.1
ABC transporter (iron.B12.siderophore.hemin), periplasmic substrate-binding component.
 
     0.728
EPR75243.1
Hypothetical protein.
 
  
 0.623
EPR77367.1
ABC-2:Amidohydrolase.
  
  
 0.599
EPR77543.1
Nitroreductase.
  
  
 0.592
EPR76835.1
Putative nitroreductase.
  
  
 0.592
EPR75707.1
Putative membrane protein.
  
  
 0.562
EPR75249.1
CAAX amino terminal protease family.
  
  
 0.562
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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