STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR77523.1Pyrimidine ABC transporter, ATP-binding protein. (297 aa)    
Predicted Functional Partners:
EPR77521.1
Pyrimidine ABC transporter, substrate-binding component.
 
 0.998
EPR77522.1
ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit.
 
 0.997
EPR77524.1
ABC transporter, permease protein.
 
 0.997
EPR76090.1
Putative CONSERVED INTEGRAL MEMBRANE ALANINE AND LEUCINE RICH PROTEIN.
  
 0.933
EPR77525.1
N5,N10-methylenetetrahydromethanopterin reductase-related protein.
 
 
 0.929
EPR77367.1
ABC-2:Amidohydrolase.
    
  0.805
EPR75644.1
ABC transporter, ATP-binding protein.
  
  
 
0.805
EPR76898.1
L-proline glycine betaine ABC transport system permease protein ProW; TCDB 3.A.1.12.1.
     
  0.801
EPR76878.1
Transmembrane protein.
     
  0.800
EPR76897.1
L-proline glycine betaine ABC transport system permease protein ProW; TCDB 3.A.1.12.1.
     
  0.800
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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