Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR77557.1Transmembrane protein. (214 aa)    
Predicted Functional Partners:
EPR77558.1
DedA family inner membrane protein YdjX.
 
  
  0.934
EPR77560.1
ABC transporter, periplasmic substrate-binding protein YnjB.
 
     0.893
EPR77561.1
Putative ABC-transporter transport protein.
 
     0.874
EPR77562.1
Binding-protein-dependent transport systems inner membrane component.
 
     0.799
EPR75229.1
Threonine dehydratase, catabolic.
     
  0.770
EPR77563.1
Putative ABC-transporter ATP binding protein; Belongs to the ABC transporter superfamily.
 
     0.578
EPR75462.1
Hypothetical protein; Catalyzes the cleavage of beta-carotene at its central double bond (15,15') to yield two molecules of all-trans-retinal. Belongs to the Brp/Blh beta-carotene diooxygenase family.
  
     0.532
EPR77555.1
Methyltransferase, UbiE/COQ5 family.
    
  0.509
EPR75396.1
Mercuric ion reductase.
  
     0.492
EPR76845.1
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.473
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.