STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR77561.1Putative ABC-transporter transport protein. (274 aa)    
Predicted Functional Partners:
EPR77560.1
ABC transporter, periplasmic substrate-binding protein YnjB.
 
  
  0.981
EPR77563.1
Putative ABC-transporter ATP binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.975
EPR77562.1
Binding-protein-dependent transport systems inner membrane component.
 
  
  0.961
EPR77557.1
Transmembrane protein.
 
     0.880
EPR77558.1
DedA family inner membrane protein YdjX.
 
     0.786
EPR75462.1
Hypothetical protein; Catalyzes the cleavage of beta-carotene at its central double bond (15,15') to yield two molecules of all-trans-retinal. Belongs to the Brp/Blh beta-carotene diooxygenase family.
  
     0.548
EPR77511.1
Spermidine Putrescine ABC transporter permease component PotB; TCDB 3.A.1.11.1.
  
 
  0.496
EPR76276.1
Putrescine transport system permease protein PotH; TCDB 3.A.1.11.2.
  
 
  0.496
EPR75887.1
Spermidine Putrescine ABC transporter permease component PotB; TCDB 3.A.1.11.1.
  
 
  0.496
EPR75686.1
Spermidine Putrescine ABC transporter permease component PotB; TCDB 3.A.1.11.1.
  
 
  0.496
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.