Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR77346.1Cyclase/dehydrase. (157 aa)    
Predicted Functional Partners:
EPR77345.1
Protein of unknown function DUF1130.
       0.686
EPR76406.1
Hypothetical protein.
 
     0.526
EPR77347.1
Hypothetical protein.
       0.511
EPR77349.1
HipA.
 
     0.509
EPR75135.1
Hypothetical protein.
  
     0.490
EPR75872.1
Hypothetical protein.
  
     0.470
EPR76555.1
Hypothetical protein.
  
     0.463
EPR77348.1
Hypothetical protein.
       0.443
EPR77266.1
Putative secreted protein.
  
     0.410
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.