Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR77361.1Hypothetical protein. (270 aa)    
Predicted Functional Partners:
EPR77360.1
Integral membrane protein TerC.
       0.773
EPR77367.1
ABC-2:Amidohydrolase.
  
  
  0.765
EPR77152.1
Manganese ABC transporter, inner membrane permease protein SitD.
  
 
 0.741
EPR75123.1
Zinc ABC transporter, inner membrane permease protein ZnuB.
  
 
 0.741
EPR76878.1
Transmembrane protein.
     
  0.733
EPR76897.1
L-proline glycine betaine ABC transport system permease protein ProW; TCDB 3.A.1.12.1.
     
  0.733
EPR76898.1
L-proline glycine betaine ABC transport system permease protein ProW; TCDB 3.A.1.12.1.
     
  0.733
EPR75644.1
ABC transporter, ATP-binding protein.
     
  0.724
EPR75795.1
O-antigen export system permease protein RfbD.
  
  
  0.721
EPR76753.1
Phosphonate ABC transporter phosphate-binding periplasmic component; TCDB 3.A.1.9.1.
   
 
  0.685
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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