STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR77368.1ABC transporter. (404 aa)    
Predicted Functional Partners:
EPR77367.1
ABC-2:Amidohydrolase.
 
 0.997
EPR76997.1
L-proline glycine betaine ABC transport system permease protein ProV; TCDB 3.A.1.12.1.
 
  
 
0.925
EPR77207.1
L-proline glycine betaine ABC transport system permease protein ProV; TCDB 3.A.1.12.1.
 
  
 
0.833
EPR77369.1
Hypothetical protein.
  
    0.774
EPR77395.1
Hypothetical protein.
 
 0.755
EPR75363.1
ABC transporter, ATP-binding protein.
 
  
 
0.712
EPR75625.1
ABC transporter.
  
  
  0.689
EPR77380.1
Putative ABC transporter ATP-binding protein.
  
  0.674
EPR77370.1
Aspartate aminotransferase.
       0.671
EPR76647.1
ATP-binding protein of ABC transporter.
  
  0.651
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.