Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EPR77242.1Nucleoside-diphosphate-sugar epimerase. (490 aa)    
Predicted Functional Partners:
EPR75012.1
Sarcosine oxidase, subunit alpha.
   
 0.979
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 0.962
EPR76729.1
Endo-1,4-beta-xylanase B precursor.
  
  0.950
EPR75573.1
Ubiquinol-cytochrome C reductase iron-sulfur subunit.
  
 
 0.929
EPR75335.1
Succinate dehydrogenase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
   
 
 0.881
EPR77277.1
Peptidase, M16 family; Belongs to the peptidase M16 family.
   
 
 0.862
EPR75572.1
Ubiquinol--cytochrome c reductase, cytochrome B subunit.
   
 
 0.823
EPR75568.1
Cytochrome c oxidase polypeptide II.
   
   0.812
EPR75575.1
Cytochrome c oxidase polypeptide III.
    
   0.811
EPR75569.1
Cytochrome c oxidase polypeptide I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
    
 
 0.799
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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