Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EPR77245.1Glycerophosphoryl diester phosphodiesterase; Overlaps CDS with the same product name; overlaps another CDS with the same product name. (65 aa)    
Predicted Functional Partners:
EPR77244.1
Glycerophosphoryl diester phosphodiesterase; Overlaps CDS with the same product name; overlaps another CDS with the same product name.
      0.964
EPR76513.1
Glycerophosphoryl diester phosphodiesterase.
     
  0.703
EPR75588.1
Glycerophosphoryl diester phosphodiesterase.
     
  0.703
EPR76978.1
Mucin-like protein 1 precursor.
    
   0.586
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
       0.542
EPR77242.1
Nucleoside-diphosphate-sugar epimerase.
  
    0.476
EPR75235.1
Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.419
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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