Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR77256.1Hypothetical protein. (360 aa)    
Predicted Functional Partners:
EPR76824.1
Hypothetical protein.
  
     0.770
EPR76439.1
Hypothetical protein.
  
     0.699
EPR77247.1
Hypothetical protein.
  
     0.692
EPR76869.1
Hypothetical protein.
  
     0.641
EPR76380.1
Hypothetical protein.
  
     0.621
EPR77382.1
Hypothetical protein.
  
     0.610
EPR75104.1
Hypothetical protein.
  
     0.600
EPR77249.1
Hypothetical protein.
  
     0.599
EPR75930.1
Integral membrane protein.
  
     0.597
EPR76382.1
Hypothetical protein.
  
     0.596
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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