Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR77278.1Phosphoglycerate mutase. (200 aa)    
Predicted Functional Partners:
EPR77277.1
Peptidase, M16 family; Belongs to the peptidase M16 family.
       0.800
EPR76949.1
Hypothetical protein.
  
     0.744
EPR76037.1
Hypothetical protein.
  
     0.737
EPR76249.1
Spermidine acetyltransferase.
  
     0.726
EPR75229.1
Threonine dehydratase, catabolic.
     
  0.713
EPR77250.1
Putative helicase regulator.
  
 
  0.692
EPR75751.1
Hypothetical protein.
  
     0.686
EPR75077.1
Hypothetical protein.
  
     0.666
EPR76411.1
Phage-related protein.
  
     0.662
EPR77600.1
Hypothetical protein.
  
     0.659
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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