Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EPR77287.1Ribonuclease J2 (endoribonuclease in RNA processing); Overlaps CDS with the same product name; overlaps another CDS with the same product name. (145 aa)    
Predicted Functional Partners:
EPR77288.1
Ribonuclease J2 (endoribonuclease in RNA processing); Overlaps CDS with the same product name; overlaps another CDS with the same product name.
     0.994
EPR77290.1
Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
 
     0.631
EPR77289.1
Hypothetical protein.
       0.594
EPR77291.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
    0.581
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
  
    0.573
EPR77292.1
C-terminal domain of CinA type S; Belongs to the CinA family.
  
    0.572
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
  
 0.568
EPR77096.1
Octaprenyl diphosphate synthase; Dimethylallyltransferase; (2E,6E)-farnesyl diphosphate synthase; Geranylgeranyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
    0.557
EPR75538.1
Octaprenyl diphosphate synthase; Dimethylallyltransferase; (2E,6E)-farnesyl diphosphate synthase; Geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
  
    0.557
EPR77285.1
Dihydrofolate reductase.
       0.553
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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