Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EPR77289.1Hypothetical protein. (41 aa)    
Predicted Functional Partners:
EPR77290.1
Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
       0.678
EPR77291.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.678
EPR77292.1
C-terminal domain of CinA type S; Belongs to the CinA family.
       0.664
EPR77287.1
Ribonuclease J2 (endoribonuclease in RNA processing); Overlaps CDS with the same product name; overlaps another CDS with the same product name.
       0.594
EPR77288.1
Ribonuclease J2 (endoribonuclease in RNA processing); Overlaps CDS with the same product name; overlaps another CDS with the same product name.
       0.594
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
       0.420
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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