STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR77298.1Putative transcriptional regulatory protein. (102 aa)    
Predicted Functional Partners:
EPR77299.1
Hypothetical protein.
       0.699
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
     
 0.584
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
      
 0.560
EPR76084.1
Uncharacterized protein Q1 colocalized with Q.
  
     0.545
EPR77427.1
Hypothetical protein.
  
     0.543
EPR75556.1
Possibly a cell division protein, antigen 84 in Mycobacteria.
  
     0.533
EPR76094.1
Hypothetical protein.
  
     0.531
EPR75555.1
Putative membrane protein.
  
     0.524
EPR75527.1
Transcriptional regulator, MerR family.
  
    0.520
EPR77010.1
DNA polymerase III delta subunit.
  
     0.510
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.