Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR77313.1Hypothetical protein. (255 aa)    
Predicted Functional Partners:
EPR77308.1
Hypothetical protein.
 
  
  0.845
EPR76508.1
Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion.
  
 
   0.792
hisA
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Acting phosphoribosylanthranilate isomerase.
       0.782
EPR76290.1
Hypothetical protein.
  
     0.691
EPR75774.1
Putative cytochrome P450 hydroxylase.
   
  0.666
EPR76786.1
Hypothetical protein.
  
     0.660
hisC
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
    0.656
hisB
Imidazoleglycerol-phosphate dehydratase.
       0.647
hisH
Imidazole glycerol phosphate synthase amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
       0.647
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
     
  0.646
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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