Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EPR77210.1L-proline glycine betaine binding ABC transporter protein ProX; TCDB 3.A.1.12.1. (307 aa)    
Predicted Functional Partners:
EPR77208.1
L-proline glycine betaine ABC transport system permease protein ProW; TCDB 3.A.1.12.1.
 
 0.997
EPR77209.1
Glycine betaine ABC transport system permease protein.
 
  0.997
EPR76702.1
Glycine betaine ABC transport system permease protein.
 
  0.992
EPR76070.1
Binding-protein-dependent transport systems inner membrane component.
 
 
  0.990
EPR77207.1
L-proline glycine betaine ABC transport system permease protein ProV; TCDB 3.A.1.12.1.
 
 0.984
EPR76072.1
Putative transporter permease.
 
 
 0.983
EPR76999.1
Glycine betaine ABC transport system permease protein.
 
  0.976
EPR76997.1
L-proline glycine betaine ABC transport system permease protein ProV; TCDB 3.A.1.12.1.
 
 0.946
EPR76704.1
L-proline glycine betaine ABC transport system permease protein ProV; TCDB 3.A.1.12.1.
 
 0.945
EPR76998.1
L-proline glycine betaine ABC transport system permease protein ProW; TCDB 3.A.1.12.1.
 
 0.943
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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