Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR77086.1Type I restriction-modification system, specificity subunit S. (387 aa)    
Predicted Functional Partners:
EPR77089.1
Type I restriction-modification system, DNA-methyltransferase subunit M.
 
 0.996
EPR77085.1
Type I restriction-modification system, restriction subunit R; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.970
EPR77053.1
Type I restriction-modification system, DNA-methyltransferase subunit M.
  
 0.933
EPR75864.1
Type I restriction-modification system, DNA-methyltransferase subunit M.
  
 0.933
EPR77225.1
Hypothetical protein.
  
 0.923
EPR77088.1
Putative DNA-binding protein in cluster with Type I restriction-modification system; Overlaps CDS with the same product name; overlaps another CDS with the same product name.
  
    0.881
EPR77087.1
Putative DNA-binding protein in cluster with Type I restriction-modification system; Overlaps CDS with the same product name; overlaps another CDS with the same product name.
  
    0.860
EPR75865.1
Hypothetical protein.
  
  0.855
atpF
ATP synthase B chain; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
   
 0.822
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
    
  0.740
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.