Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EPR77131.1Sugar-transport protein. (146 aa)    
Predicted Functional Partners:
EPR77130.1
PTS system, lactose/cellobiose specific IIB subunit.
 
 
 0.996
EPR77129.1
Putative integral membrane protein.
 
 
 0.973
EPR75272.1
PTS system, fructose-specific IIB component; PTS system, fructose-specific IIC component.
 
 
 0.908
EPR75315.1
PTS system, lactose/cellobiose specific IIB subunit.
 
 
 0.896
EPR76307.1
Phosphotransferase system, phosphocarrier protein HPr.
  
 
 0.738
EPR75271.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
  
 
 0.637
EPR76308.1
PTS system, galactitol-specific IIC component.
 
 
 0.630
EPR76309.1
PTS system, galactitol-specific IIB component.
 
 
 0.560
EPR77132.1
Transcriptional regulator, ROK family protein.
    
  0.555
EPR75671.1
Putative P-loop-containing kinase; Displays ATPase and GTPase activities.
  
    0.518
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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