STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR77182.1PaaD-like protein (DUF59) involved in Fe-S cluster assembly. (183 aa)    
Predicted Functional Partners:
EPR77183.1
Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2.
 
    0.984
EPR77185.1
Iron-sulfur cluster assembly ATPase protein SufC.
 
  
 0.904
EPR77184.1
Iron-sulfur cluster assembly protein SufD.
 
   
 0.892
EPR77186.1
Iron-sulfur cluster assembly protein SufB.
 
   
 0.872
EPR77188.1
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
  
 0.715
EPR77181.1
Niacin transporter NiaP.
       0.693
EPR77187.1
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
 
     0.622
EPR75750.1
Hypothetical protein.
  
 
 0.589
EPR77189.1
Iron-sulfur cluster regulator SufR.
       0.588
EPR75652.1
Iron-sulfur cluster assembly ATPase protein SufC.
 
  
 0.518
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.