Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
EPR77187.1Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (106 aa)    
Predicted Functional Partners:
EPR77095.1
Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type.
 
 
 0.899
EPR75000.1
Glutamate synthase [NADPH] small chain.
   
 0.876
EPR74999.1
Glutamate synthase [NADPH] large chain.
     
 0.834
EPR76151.1
Succinate dehydrogenase flavoprotein subunit.
  
 0.822
EPR75334.1
Succinate dehydrogenase flavoprotein subunit.
  
 0.822
EPR75935.1
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex; 2-oxoglutarate dehydrogenase E1 component.
     
  0.787
EPR77189.1
Iron-sulfur cluster regulator SufR.
       0.781
EPR77188.1
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
       0.773
EPR77182.1
PaaD-like protein (DUF59) involved in Fe-S cluster assembly.
 
     0.621
EPR75718.1
N-succinyl-L,L-diaminopimelate aminotransferase alternative.
   
 0.616
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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