Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EPR76762.1Ferric iron ABC transporter, permease protein. (536 aa)    
Predicted Functional Partners:
EPR76763.1
ABC transporter-like protein; Belongs to the ABC transporter superfamily.
 
  0.962
EPR76761.1
Ferric iron ABC transporter, iron-binding protein.
 
 
  0.948
EPR76809.1
Fe3+/thiamine transport system, secreted component; ABC transporter substrate-binding protein.
 
 
 0.924
EPR77149.1
Ferric iron ABC transporter, iron-binding protein.
 
 
  0.897
EPR76175.1
Ferric iron ABC transporter, iron-binding protein.
 
 
  0.897
EPR76173.1
ABC transporter component; Belongs to the ABC transporter superfamily.
 
  0.871
EPR75854.1
Transport ATP-binding protein CydCD.
     
  0.821
EPR76807.1
ABC-type, ATP binding, spermidine/spermine transporter, PotA.
 
  0.741
EPR75685.1
Putrescine transport ATP-binding protein PotA; TCDB 3.A.1.11.1; Belongs to the ABC transporter superfamily.
 
  0.724
potA
Putrescine transport ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  0.723
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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