Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EPR76807.1ABC-type, ATP binding, spermidine/spermine transporter, PotA. (383 aa)    
Predicted Functional Partners:
EPR76808.1
Ferric iron ABC transporter, permease protein.
 
  0.965
EPR77512.1
Spermidine Putrescine ABC transporter permease component potC; TCDB _3.A.1.11.1.
  
  0.845
EPR75887.1
Spermidine Putrescine ABC transporter permease component PotB; TCDB 3.A.1.11.1.
 
  0.838
EPR75686.1
Spermidine Putrescine ABC transporter permease component PotB; TCDB 3.A.1.11.1.
 
  0.834
EPR76669.1
Molybdenum transport system permease protein ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
  0.832
EPR77511.1
Spermidine Putrescine ABC transporter permease component PotB; TCDB 3.A.1.11.1.
 
  0.831
EPR75687.1
Spermidine Putrescine ABC transporter permease component potC; TCDB _3.A.1.11.1.
  
  0.825
EPR76276.1
Putrescine transport system permease protein PotH; TCDB 3.A.1.11.2.
 
  0.788
EPR76317.1
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC; TCDB 3.A.1.1.3; Belongs to the ABC transporter superfamily.
  
  
 
0.788
EPR75644.1
ABC transporter, ATP-binding protein.
  
  
 
0.780
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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