Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EPR76833.1Unchracterized transporter YcgO; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (506 aa)    
Predicted Functional Partners:
EPR76752.1
Hypothetical protein.
   
 
 0.709
EPR75374.1
Proline dehydrogenase (Proline oxidase); Delta-1-pyrroline-5-carboxylate dehydrogenase.
 
  
 0.666
EPR77156.1
Sodium-dependent transporter.
 
 
 0.662
EPR77226.1
Helicase, SNF2 family.
   
  0.509
cpdA
3',5'-cyclic-nucleotide phosphodiesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
  
    0.485
EPR76835.1
Putative nitroreductase.
       0.480
EPR76378.1
DNA repair helicase.
   
 
  0.480
EPR75631.1
DNA or RNA helicases of superfamily II.
   
 
  0.480
EPR76829.1
Transporter, LysE family.
     
 0.461
EPR76830.1
Endonuclease; Belongs to the UPF0102 family.
       0.413
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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