Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EPR76869.1Hypothetical protein. (166 aa)    
Predicted Functional Partners:
EPR76868.1
Cytochrome c-type biogenesis protein CcdA.
 
 
 0.989
EPR75481.1
Putative thioredoxin.
 
 
 0.819
EPR76367.1
Peptide methionine sulfoxide reductase MsrB.
    
 
 0.805
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
    
 
 0.802
EPR77111.1
Thiol:disulfide oxidoreductase.
  
 
 0.784
EPR76884.1
Thioredoxin.
  
 
 0.784
EPR77594.1
Polysaccharide biosynthesis protein.
  
     0.719
EPR75902.1
Hypothetical protein.
 
     0.709
EPR75806.1
Putative oxygenase.
  
     0.705
EPR77465.1
Very large tegument protein.
 
 
 0.668
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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