Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EPR76876.1Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine. (182 aa)    
Predicted Functional Partners:
EPR76878.1
Transmembrane protein.
 
  
 0.960
EPR76877.1
ATPase component protein.
 
  
 0.933
EPR75424.1
Hydroxymethylpyrimidine phosphate kinase ThiD; Thiaminase II involved in salvage of thiamin pyrimidine moiety.
  
    0.896
EPR76879.1
Hypothetical protein.
 
     0.720
EPR76875.1
Hypothetical protein.
       0.572
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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