Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR76885.1Multi-domain regulatory protein. (1058 aa)    
Predicted Functional Partners:
EPR76752.1
Hypothetical protein.
    
 0.890
ribA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
     
  0.830
EPR76541.1
Hypothetical protein.
  
     0.744
EPR75764.1
Rhs element Vgr protein.
  
     0.733
EPR75479.1
Zn-dependent protease with chaperone function.
  
     0.710
EPR75384.1
Hypothetical protein.
  
     0.678
EPR76978.1
Mucin-like protein 1 precursor.
 
  
 0.651
EPR77575.1
Hypothetical protein.
  
     0.642
EPR76060.1
Hypothetical protein.
  
     0.641
EPR77491.1
Putative Clp protease subunit.
  
     0.634
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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