STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR76892.1Single-stranded DNA-binding protein. (177 aa)    
Predicted Functional Partners:
EPR76324.1
DNA polymerase III delta prime subunit.
  
 
 0.927
dnaX
DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
    
 0.911
EPR75558.1
DNA polymerase III.
    
 0.864
EPR75559.1
DNA polymerase III alpha subunit.
    
 0.864
dnaE2
DNA polymerase III alpha subunit protein; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
    
 0.864
EPR75407.1
DNA polymerase III epsilon subunit.
    
 0.864
rpsB
SSU ribosomal protein S2p (SAe); Belongs to the universal ribosomal protein uS2 family.
   
  0.842
EPR75100.1
Single-stranded DNA-binding protein.
     
 0.838
EPR77579.1
ATP-dependent DNA helicase RecQ.
    
 0.834
EPR76392.1
ATP-dependent DNA helicase RecQ.
    
 0.834
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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