Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
EPR76918.1Putative transcriptional regulator. (132 aa)    
Predicted Functional Partners:
EPR75229.1
Threonine dehydratase, catabolic.
    
  0.794
EPR76919.1
Hypothetical protein.
       0.776
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.774
EPR76917.1
Hypothetical protein.
       0.757
EPR75205.1
Putative oxidase.
     
  0.598
EPR75392.1
Hypothetical protein.
  
     0.481
EPR76314.1
O-succinylhomoserine sulfhydrylase.
  
 
 0.448
EPR75924.1
O-succinylhomoserine sulfhydrylase.
  
 
 0.448
EPR75747.1
Cystathionine beta-lyase, type II.
  
  
  0.448
EPR75026.1
Chromosome segregation protein SMC-like protein.
  
     0.442
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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