Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EPR76931.1Putative integral membrane protein. (1693 aa)    
Predicted Functional Partners:
EPR77197.1
TonB-dependent receptor.
  
 
 0.930
EPR75272.1
PTS system, fructose-specific IIB component; PTS system, fructose-specific IIC component.
     
 0.882
EPR77465.1
Very large tegument protein.
  
    0.784
EPR75716.1
Hypothetical protein.
 
     0.778
EPR76978.1
Mucin-like protein 1 precursor.
  
    0.772
EPR76991.1
Hypothetical protein.
  
   
 0.765
EPR76850.1
Large Ala/Glu-rich protein.
  
     0.753
EPR75097.1
Hypothetical protein.
 
     0.753
EPR76968.1
Hypothetical protein.
  
     0.751
EPR77258.1
Hypothetical protein.
  
     0.749
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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