Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR76949.1Hypothetical protein. (76 aa)    
Predicted Functional Partners:
EPR76950.1
Histone acetyltransferase HPA2.
 
     0.832
valS
Valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner.
       0.773
EPR76037.1
Hypothetical protein.
  
     0.773
EPR75077.1
Hypothetical protein.
  
     0.772
EPR75609.1
Heat shock protein.
  
     0.770
EPR75751.1
Hypothetical protein.
  
     0.767
EPR75176.1
lysyl-tRNA synthetase.
  
     0.765
EPR76372.1
Hypothetical protein.
  
     0.761
EPR77600.1
Hypothetical protein.
  
     0.760
EPR76590.1
Membrane protein.
  
     0.760
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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