STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metNMethionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (329 aa)    
Predicted Functional Partners:
EPR76981.1
Methionine ABC transporter permease protein.
 
 0.999
EPR76982.1
Methionine ABC transporter substrate-binding protein; Belongs to the nlpA lipoprotein family.
 
 0.999
EPR76743.1
Hypothetical protein.
 
     
0.787
EPR77361.1
Hypothetical protein.
   
   0.694
EPR77148.1
Mn-dependent transcriptional regulator MntR.
   
   0.694
EPR76385.1
Iron-dependent repressor IdeR/DtxR.
    
   0.692
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
  
 0.567
EPR77399.1
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.535
EPR76647.1
ATP-binding protein of ABC transporter.
 
    
0.496
EPR75900.1
Homoserine dehydrogenase.
   
 
 0.490
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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