Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EPR77051.1Dipeptide transport ATP-binding protein DppD; TCDB 3.A.1.5.2. (247 aa)    
Predicted Functional Partners:
EPR76180.1
Oligopeptide transport system permease protein OppC; TCDB 3.A.1.5.1.
 
  0.946
EPR76188.1
Dipeptide transport system permease protein DppC; TCDB 3.A.1.5.2.
 
  0.934
EPR75192.1
Dipeptide transport system permease protein DppC; TCDB 3.A.1.5.2.
 
  0.934
EPR76954.1
Oligopeptide transport system permease protein OppC; TCDB 3.A.1.5.1.
 
  0.900
EPR75186.1
Dipeptide transport system permease protein DppC; TCDB 3.A.1.5.2.
 
  0.893
EPR75187.1
Putative glutathione transporter, permease component.
  
  0.876
EPR76179.1
ABC di/oligopeptide transporter, inner membrane subunit.
  
  0.870
EPR75193.1
Dipeptide transport system permease protein DppB; TCDB 3.A.1.5.2; putative hemin permease.
  
  0.860
EPR76189.1
Dipeptide transport system permease protein DppB; TCDB 3.A.1.5.2.
  
  0.858
EPR76955.1
Oligopeptide transport system permease protein OppB; TCDB 3.A.1.5.1.
  
  0.841
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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