Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EPR76743.1Hypothetical protein. (623 aa)    
Predicted Functional Partners:
metN
Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
   
 
0.912
EPR75190.1
Oligopeptide transport ATP-binding protein OppF; TCDB 3.A.1.5.1.
 
   
 
0.839
EPR75854.1
Transport ATP-binding protein CydCD.
  
 
  0.817
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
  0.785
potA-2
Putrescine transport ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
   
 
0.780
EPR77571.1
ABC-type Fe3+-siderophore transport system, ATPase component.
 
 
 
 
0.755
EPR76205.1
Alcohol dehydrogenase.
   
  0.677
EPR77367.1
ABC-2:Amidohydrolase.
  
  
 0.669
rpsB
SSU ribosomal protein S2p (SAe); Belongs to the universal ribosomal protein uS2 family.
    
  0.661
EPR76898.1
L-proline glycine betaine ABC transport system permease protein ProW; TCDB 3.A.1.12.1.
     
  0.658
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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