Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR76715.1Hypothetical protein. (328 aa)    
Predicted Functional Partners:
EPR76772.1
Diacylglycerol kinase-related protein.
  
  
 
0.874
EPR76845.1
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.844
EPR76783.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
    
  0.828
EPR75533.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
    
  0.828
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
     
  0.826
EPR77066.1
Glycosyltransferase.
   
 
  0.824
EPR76713.1
HAD-superfamily hydrolase, subfamily IIB.
 
     0.722
EPR76507.1
Glycerol-3-phosphate dehydrogenase.
    
 0.719
EPR75310.1
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.719
serS
Seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
       0.653
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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