Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR76725.1Putative transporter. (445 aa)    
Predicted Functional Partners:
EPR76724.1
Regulatory protein, MarR.
 
     0.851
EPR75619.1
Enhanced intracellular survival protein.
   
    0.630
EPR76723.1
Lysophospholipase; Monoglyceride lipase; putative.
    
  0.588
EPR76722.1
HIT family protein.
       0.551
EPR76721.1
Lipoate-protein ligase A.
 
     0.542
hmuV
Heme ABC transporter, ATPase component HmuV; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
       0.482
EPR76720.1
Heme ABC transporter, permease protein HmuU; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.482
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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