STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR76623.1ATP-binding protein of ABC transporter. (596 aa)    
Predicted Functional Partners:
EPR76624.1
Hypothetical protein.
 
  0.894
EPR76626.1
Capsular polysaccharide synthesis enzyme CAP5I; Overlaps CDS with the same product name.
 
  0.873
EPR76627.1
Capsular polysaccharide synthesis enzyme.
 
  0.866
EPR76625.1
Capsular polysaccharide synthesis enzyme; Overlaps CDS with the same product name.
 
  0.856
EPR77167.1
Cell division protein FtsH; Belongs to the AAA ATPase family.
 
 
 0.732
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.588
EPR75854.1
Transport ATP-binding protein CydCD.
  
 
 
0.579
EPR76683.1
Sulfur carrier protein adenylyltransferase ThiF.
  
  0.571
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.549
EPR77147.1
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
    
   0.544
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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