Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR76408.1Hypothetical protein. (181 aa)    
Predicted Functional Partners:
EPR77590.1
Exopolysaccharide production protein.
  
     0.773
EPR75200.1
Hypothetical protein.
  
     0.769
EPR76598.1
Hypothetical protein.
  
     0.768
EPR75609.1
Heat shock protein.
  
     0.763
EPR76887.1
Hypothetical protein.
  
     0.753
EPR77465.1
Very large tegument protein.
  
     0.747
EPR76037.1
Hypothetical protein.
  
     0.734
EPR75927.1
Hypothetical protein.
  
     0.734
EPR75104.1
Hypothetical protein.
  
     0.732
EPR76043.1
Hypothetical protein.
  
     0.721
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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