Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
EPR76437.1Fimbrial assembly. (241 aa)    
Predicted Functional Partners:
EPR76436.1
Type IV pilus biogenesis protein PilM.
  
 0.985
EPR76438.1
Type IV pilus biogenesis protein PilO.
  
 
 0.983
EPR76430.1
Type IV fimbrial assembly protein PilC.
   
 
 0.788
EPR76435.1
Leader peptidase (Prepilin peptidase); N-methyltransferase.
  
  
 0.772
EPR76426.1
Type IV fimbrial assembly, ATPase PilB.
  
 
 0.761
EPR76434.1
Hypothetical protein.
  
  
 0.726
EPR76432.1
Hypothetical protein.
  
  
 0.725
EPR76433.1
Prepilin-type cleavage/methylation-like protein.
  
  
 0.725
EPR76439.1
Hypothetical protein.
       0.571
EPR76431.1
Hypothetical protein.
  
  
 0.560
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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