Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EPR76353.1High-affinity branched-chain amino acid transport system permease protein LivH; TCDB 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family. (292 aa)    
Predicted Functional Partners:
EPR76354.1
Branched-chain amino acid transport system permease protein LivM; TCDB 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.997
EPR76350.1
Extracellular ligand-binding receptor.
 
 
 0.986
EPR76351.1
Branched-chain amino acid transport ATP-binding protein LivG; TCDB 3.A.1.4.1.
 
 
 0.982
EPR76352.1
Branched-chain amino acid transport ATP-binding protein LivF; TCDB 3.A.1.4.1.
 
 
 0.973
EPR75995.1
Branched-chain amino acid transport system permease protein LivM; TCDB 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.970
EPR76500.1
Branched-chain amino acid transport system permease protein LivM; TCDB 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.969
EPR75992.1
Branched-chain amino acid transport ATP-binding protein LivG; TCDB 3.A.1.4.1.
 
 
 0.961
EPR76498.1
Branched-chain amino acid transport ATP-binding protein LivF; TCDB 3.A.1.4.1.
 
 
 0.949
EPR76499.1
Branched-chain amino acid transport ATP-binding protein LivG; TCDB 3.A.1.4.1.
 
 
 0.935
EPR75993.1
Branched-chain amino acid transport ATP-binding protein LivF; TCDB 3.A.1.4.1.
 
 
 0.922
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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